top of page

Firemetrics and FHIR as a Semantic Layer for Business Analytics

  • Writer: Prof. Dr. med. Felix Nensa
    Prof. Dr. med. Felix Nensa
  • Aug 25
  • 5 min read
Why FHIR is the best semantic layer for analyzing healthcare data across many sites
Why FHIR is the best semantic layer for analyzing healthcare data across many sites

Healthcare data systems are notoriously fragmented, shaped by decades of local development, vendor lock-in, and ad hoc integrations. The result: inaccessible data, high integration costs, and fragile analytics pipelines. While business intelligence tools promise insight, they often remain disconnected from the operational data reality.


The semantic layer paradigm proposes a solution: a structured interface that translates human concepts (like “lab result” or “length of stay”) into machine-executable queries. In healthcare, the FHIR (Fast Healthcare Interoperability Resources) standard offers a domain-native, globally accepted semantic layer. Firemetrics is a platform that implements FHIR semantics natively and makes them queryable with standard SQL. It enables business analytics that are explainable, reproducible, and future-proof.


What Is a Semantic Layer?


A semantic layer sits between raw data and user-facing analytics tools. It standardizes naming, relationships, and calculations, allowing complex healthcare queries to be expressed using clinically meaningful abstractions.

To illustrate the value, consider a query to find patients with overlapping Emergency Room encounters — a scenario relevant for infection tracing, capacity management, or social medicine.


🔴 Without a Semantic LayerIn a legacy system, this query might look like:


ree

To interpret this query correctly, you need to know:

  • That er_admissions exists and stores both arrival and discharge timestamps

  • That 'ER' is the correct value for visit_type

  • That range overlap logic must be manually implemented with GREATEST/LEAST


This is brittle: it encodes business logic (what is an ER encounter?) and technical logic (how to compute time overlaps) directly in SQL.


✅ With a Semantic Layer (FHIR via Firemetrics) Using Firemetrics, which models data in a FHIR-native semantic layer, the same logic becomes:


ree

Here:

  • The class EMER is not a magic string — itʼs a controlled, internationally standardized vocabulary code defined in HL7ʼs ActCode system. Specifically, EMER represents “emergency”:“A patient encounter that takes place at a dedicated healthcare service delivery location where patients with urgent or emergent problems are provided care.”

  • In Firemetrics, this code is resolved using fmx_read_code(), ensuring semantic consistency across all queries and system boundaries. This not only enforces correct interpretation but also enables interoperability with external FHIR-based systems and datasets.

  • Encounter period merging is encapsulated in range_merge()

  • Time range overlap logic uses PostgreSQL native operators (&&, *) on range types.

  • Clinical concepts (encounter class, subject, period) are standardized and documented.


This is self-documenting, reusable, and interoperable. You donʼt need to rediscover or re-implement business logic — itʼs already embedded in the semantic layer. By abstracting away inconsistent naming, undocumented joins, and domain logic, a semantic layer like FHIR enables analysts to focus on the question, not the quirks of the source system.


FHIR as a Semantic Layer


FHIR is not just a data exchange standard, it is a semantic model of healthcare. Each resource (e.g., Patient, Observation, Encounter) comes with strict field definitions, data types, value sets, and documented relationships.


This turns FHIR into a machine-readable ontology of healthcare. Its main benefits:


  • Global standardization: FHIR is recognized internationally.

  • Interoperability: Compatible with external registries, research platforms, and public health systems.

  • Semantic clarity: Clear definitions reduce ambiguity in analysis.

  • Tooling ecosystem: Mature libraries, validators, and developer communities.


Firemetrics leverages these characteristics and maps them into a queryable relational model using mature technologies like PostgreSQL.


Example: Scaling Across a Clinic Chain


Semantic FHIR layer for running analytics on healthcare data in a clinic or hospital with multiple locations
Semantic FHIR layer for running analytics on healthcare data in a clinic or hospital with multiple locations

Consider a clinic chain with 30 different locations. Each location has developed its own data storage system over time, often using different vendors and proprietary formats. Running business intelligence across all of them becomes extremely challenging. Without a common model, the organization would need to invent its own semantic layer, mapping every concept of patient care manually across systems. This may work at first with a limited number of sites and systems, but as soon as new clinics are acquired or additional systems need to be integrated, the complexity grows exponentially.


FHIR changes this dynamic. While the initial effort of mapping each system into FHIR is still required, it is a one-time strategic investment into a semantic model that has already been designed by the world’s leading healthcare data experts. FHIR anticipates virtually every patient journey and use case in healthcare, making it the most comprehensive and robust data model available. This ensures that each new system added to the clinic chain can be aligned consistently, instead of requiring fragile, custom mappings.


The long-term payoff is even greater: more and more healthcare systems natively expose FHIR APIs. As the clinic chain expands, onboarding new systems becomes dramatically simpler, as they can often be connected directly via FHIR rather than through bespoke ETL pipelines.


Firemetrics: Querying FHIR with SQL


Firemetrics exposes FHIR-modeled data in a structure compatible with SQL-based tools - no need to learn a custom query language. It makes FHIR resources explorable via standard BI tools or even Python notebooks backed by Firemetrics DB.


Example: To count all patients born in 1995, grouped by gender, instead of needing to parse a JSON-based FHIR Observation, you can simply write:


ree

Or to calculate average length of Inpatient Encounters:


ree

This “semantic flattening” bridges the gap between clinical systems and analytics.


Business Value: FHIR + Firemetrics as Strategic Architecture


The benefits of an initial FHIR data integration pay off right from the beginning.
The benefits of an initial FHIR data integration pay off right from the beginning.

Short-Term

  • Low marginal ROI if existing systems are operational and data volumes are modest.

  • Technical stakeholders may resist due to complexity or redundancy.


Medium-Term

  • Cost reductions as upstream and downstream systems adopt FHIR (no more mapping, less code).

  • Avoidance of future rework in response to new regulations, reporting demands, or research needs.

  • Simplified onboarding: New developers, analysts, and researchers can leverage standard FHIR documentation and ecosystem tools.


Long-Term

  • Strategic flexibility: FHIR decouples analytics from vendor-specific data models.

  • Resilience to change: Whether systems evolve, vendors are replaced, or new KPIs emerge — your semantic foundation remains stable.

  • Cultural transformation: Firemetrics enables a shift from reactive reporting to proactive analytics.


Simplified Onboarding for Staff


One of the hidden costs of maintaining a custom semantic layer is the onboarding of new employees. If an organization relies on its own mapping logic, every new analyst or engineer must first understand a data model invented in-house. Documentation is often incomplete, and the original designers may no longer be available to explain their logic.

FHIR eliminates this barrier. Because it is globally standardized and extensively documented, new employees can quickly learn FHIR using the wealth of publicly available resources. Once they understand FHIR, they can immediately interpret how the organization’s systems were mapped into the model. This reduces training time, lowers dependency on internal experts, and ensures knowledge continuity even as staff change.


Summary


FHIR as a semantic layer turns healthcare data into a reusable, understandable, and powerful foundation for analytics. Firemetrics makes this model actionable through SQL. Compared to brittle, bespoke ETL pipelines, the combination of FHIR + Firemetrics offers a clear strategic path:

  • Reduced integration cost

  • Future-proof interoperability

  • Accelerated analytics

  • Cultural and technical continuity


Firemetrics isnʼt just a data infrastructure decision — itʼs a business resilience strategy.

Comments


bottom of page